Education
Interactive Molecular Dynamics
- Comparing inertial motion and diffusive motion
- Calculating free energies from histograms and mean forces and the need for enhanced sampling techniques
- Model of ion flow through a membrane channel
Javascript simulation code
Códigos Python para el curso: “Programación orientada a simulación molecular y termodinámica”
- particulas_dia1.py
- particulas_dia2.py
- particulas_dia2_vmd.py
- particulas_dia3_periodico.py
- oxigeno_pairlist.py
Web-GL based molecular dynamics (in progress)
Developed by Pedro Dousseau
Water, salt, and methane system
My Quora Posts
The Comer Group has a developed a program to introduce middle school students to computer programming and computational physics and its use computer animation, videogames, and science. Using the live code examples below, students from Bergman Elementary in Manhattan, Kansas have learned the basics of simulating motion on computers.
Live code examples
